test_recfunctions.py 40.2 KB
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 717 718 719 720 721 722 723 724 725 726 727 728 729 730 731 732 733 734 735 736 737 738 739 740 741 742 743 744 745 746 747 748 749 750 751 752 753 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 775 776 777 778 779 780 781 782 783 784 785 786 787 788 789 790 791 792 793 794 795 796 797 798 799 800 801 802 803 804 805 806 807 808 809 810 811 812 813 814 815 816 817 818 819 820 821 822 823 824 825 826 827 828 829 830 831 832 833 834 835 836 837 838 839 840 841 842 843 844 845 846 847 848 849 850 851 852 853 854 855 856 857 858 859 860 861 862 863 864 865 866 867 868 869 870 871 872 873 874 875 876 877 878 879 880 881 882 883 884 885 886 887 888 889 890 891 892 893 894 895 896 897 898 899 900 901 902 903 904 905 906 907 908 909 910 911 912 913 914 915 916 917 918 919 920 921 922 923 924 925 926 927 928 929 930 931 932 933 934 935 936 937 938 939 940 941 942 943 944 945 946 947 948 949 950 951 952 953 954 955 956 957 958 959 960 961 962 963 964 965 966 967 968 969 970 971 972 973 974 975 976 977 978 979
import pytest

import numpy as np
import numpy.ma as ma
from numpy.ma.mrecords import MaskedRecords
from numpy.ma.testutils import assert_equal
from numpy.testing import assert_, assert_raises
from numpy.lib.recfunctions import (
    drop_fields, rename_fields, get_fieldstructure, recursive_fill_fields,
    find_duplicates, merge_arrays, append_fields, stack_arrays, join_by,
    repack_fields, unstructured_to_structured, structured_to_unstructured,
    apply_along_fields, require_fields, assign_fields_by_name)
get_fieldspec = np.lib.recfunctions._get_fieldspec
get_names = np.lib.recfunctions.get_names
get_names_flat = np.lib.recfunctions.get_names_flat
zip_descr = np.lib.recfunctions._zip_descr
zip_dtype = np.lib.recfunctions._zip_dtype


class TestRecFunctions:
    # Misc tests

    def setup(self):
        x = np.array([1, 2, ])
        y = np.array([10, 20, 30])
        z = np.array([('A', 1.), ('B', 2.)],
                     dtype=[('A', '|S3'), ('B', float)])
        w = np.array([(1, (2, 3.0)), (4, (5, 6.0))],
                     dtype=[('a', int), ('b', [('ba', float), ('bb', int)])])
        self.data = (w, x, y, z)

    def test_zip_descr(self):
        # Test zip_descr
        (w, x, y, z) = self.data

        # Std array
        test = zip_descr((x, x), flatten=True)
        assert_equal(test,
                     np.dtype([('', int), ('', int)]))
        test = zip_descr((x, x), flatten=False)
        assert_equal(test,
                     np.dtype([('', int), ('', int)]))

        # Std & flexible-dtype
        test = zip_descr((x, z), flatten=True)
        assert_equal(test,
                     np.dtype([('', int), ('A', '|S3'), ('B', float)]))
        test = zip_descr((x, z), flatten=False)
        assert_equal(test,
                     np.dtype([('', int),
                               ('', [('A', '|S3'), ('B', float)])]))

        # Standard & nested dtype
        test = zip_descr((x, w), flatten=True)
        assert_equal(test,
                     np.dtype([('', int),
                               ('a', int),
                               ('ba', float), ('bb', int)]))
        test = zip_descr((x, w), flatten=False)
        assert_equal(test,
                     np.dtype([('', int),
                               ('', [('a', int),
                                     ('b', [('ba', float), ('bb', int)])])]))

    def test_drop_fields(self):
        # Test drop_fields
        a = np.array([(1, (2, 3.0)), (4, (5, 6.0))],
                     dtype=[('a', int), ('b', [('ba', float), ('bb', int)])])

        # A basic field
        test = drop_fields(a, 'a')
        control = np.array([((2, 3.0),), ((5, 6.0),)],
                           dtype=[('b', [('ba', float), ('bb', int)])])
        assert_equal(test, control)

        # Another basic field (but nesting two fields)
        test = drop_fields(a, 'b')
        control = np.array([(1,), (4,)], dtype=[('a', int)])
        assert_equal(test, control)

        # A nested sub-field
        test = drop_fields(a, ['ba', ])
        control = np.array([(1, (3.0,)), (4, (6.0,))],
                           dtype=[('a', int), ('b', [('bb', int)])])
        assert_equal(test, control)

        # All the nested sub-field from a field: zap that field
        test = drop_fields(a, ['ba', 'bb'])
        control = np.array([(1,), (4,)], dtype=[('a', int)])
        assert_equal(test, control)

        # dropping all fields results in an array with no fields
        test = drop_fields(a, ['a', 'b'])
        control = np.array([(), ()], dtype=[])
        assert_equal(test, control)

    def test_rename_fields(self):
        # Test rename fields
        a = np.array([(1, (2, [3.0, 30.])), (4, (5, [6.0, 60.]))],
                     dtype=[('a', int),
                            ('b', [('ba', float), ('bb', (float, 2))])])
        test = rename_fields(a, {'a': 'A', 'bb': 'BB'})
        newdtype = [('A', int), ('b', [('ba', float), ('BB', (float, 2))])]
        control = a.view(newdtype)
        assert_equal(test.dtype, newdtype)
        assert_equal(test, control)

    def test_get_names(self):
        # Test get_names
        ndtype = np.dtype([('A', '|S3'), ('B', float)])
        test = get_names(ndtype)
        assert_equal(test, ('A', 'B'))

        ndtype = np.dtype([('a', int), ('b', [('ba', float), ('bb', int)])])
        test = get_names(ndtype)
        assert_equal(test, ('a', ('b', ('ba', 'bb'))))

        ndtype = np.dtype([('a', int), ('b', [])])
        test = get_names(ndtype)
        assert_equal(test, ('a', ('b', ())))

        ndtype = np.dtype([])
        test = get_names(ndtype)
        assert_equal(test, ())

    def test_get_names_flat(self):
        # Test get_names_flat
        ndtype = np.dtype([('A', '|S3'), ('B', float)])
        test = get_names_flat(ndtype)
        assert_equal(test, ('A', 'B'))

        ndtype = np.dtype([('a', int), ('b', [('ba', float), ('bb', int)])])
        test = get_names_flat(ndtype)
        assert_equal(test, ('a', 'b', 'ba', 'bb'))

        ndtype = np.dtype([('a', int), ('b', [])])
        test = get_names_flat(ndtype)
        assert_equal(test, ('a', 'b'))

        ndtype = np.dtype([])
        test = get_names_flat(ndtype)
        assert_equal(test, ())

    def test_get_fieldstructure(self):
        # Test get_fieldstructure

        # No nested fields
        ndtype = np.dtype([('A', '|S3'), ('B', float)])
        test = get_fieldstructure(ndtype)
        assert_equal(test, {'A': [], 'B': []})

        # One 1-nested field
        ndtype = np.dtype([('A', int), ('B', [('BA', float), ('BB', '|S1')])])
        test = get_fieldstructure(ndtype)
        assert_equal(test, {'A': [], 'B': [], 'BA': ['B', ], 'BB': ['B']})

        # One 2-nested fields
        ndtype = np.dtype([('A', int),
                           ('B', [('BA', int),
                                  ('BB', [('BBA', int), ('BBB', int)])])])
        test = get_fieldstructure(ndtype)
        control = {'A': [], 'B': [], 'BA': ['B'], 'BB': ['B'],
                   'BBA': ['B', 'BB'], 'BBB': ['B', 'BB']}
        assert_equal(test, control)

        # 0 fields
        ndtype = np.dtype([])
        test = get_fieldstructure(ndtype)
        assert_equal(test, {})

    def test_find_duplicates(self):
        # Test find_duplicates
        a = ma.array([(2, (2., 'B')), (1, (2., 'B')), (2, (2., 'B')),
                      (1, (1., 'B')), (2, (2., 'B')), (2, (2., 'C'))],
                     mask=[(0, (0, 0)), (0, (0, 0)), (0, (0, 0)),
                           (0, (0, 0)), (1, (0, 0)), (0, (1, 0))],
                     dtype=[('A', int), ('B', [('BA', float), ('BB', '|S1')])])

        test = find_duplicates(a, ignoremask=False, return_index=True)
        control = [0, 2]
        assert_equal(sorted(test[-1]), control)
        assert_equal(test[0], a[test[-1]])

        test = find_duplicates(a, key='A', return_index=True)
        control = [0, 1, 2, 3, 5]
        assert_equal(sorted(test[-1]), control)
        assert_equal(test[0], a[test[-1]])

        test = find_duplicates(a, key='B', return_index=True)
        control = [0, 1, 2, 4]
        assert_equal(sorted(test[-1]), control)
        assert_equal(test[0], a[test[-1]])

        test = find_duplicates(a, key='BA', return_index=True)
        control = [0, 1, 2, 4]
        assert_equal(sorted(test[-1]), control)
        assert_equal(test[0], a[test[-1]])

        test = find_duplicates(a, key='BB', return_index=True)
        control = [0, 1, 2, 3, 4]
        assert_equal(sorted(test[-1]), control)
        assert_equal(test[0], a[test[-1]])

    def test_find_duplicates_ignoremask(self):
        # Test the ignoremask option of find_duplicates
        ndtype = [('a', int)]
        a = ma.array([1, 1, 1, 2, 2, 3, 3],
                     mask=[0, 0, 1, 0, 0, 0, 1]).view(ndtype)
        test = find_duplicates(a, ignoremask=True, return_index=True)
        control = [0, 1, 3, 4]
        assert_equal(sorted(test[-1]), control)
        assert_equal(test[0], a[test[-1]])

        test = find_duplicates(a, ignoremask=False, return_index=True)
        control = [0, 1, 2, 3, 4, 6]
        assert_equal(sorted(test[-1]), control)
        assert_equal(test[0], a[test[-1]])

    def test_repack_fields(self):
        dt = np.dtype('u1,f4,i8', align=True)
        a = np.zeros(2, dtype=dt)

        assert_equal(repack_fields(dt), np.dtype('u1,f4,i8'))
        assert_equal(repack_fields(a).itemsize, 13)
        assert_equal(repack_fields(repack_fields(dt), align=True), dt)

        # make sure type is preserved
        dt = np.dtype((np.record, dt))
        assert_(repack_fields(dt).type is np.record)

    def test_structured_to_unstructured(self):
        a = np.zeros(4, dtype=[('a', 'i4'), ('b', 'f4,u2'), ('c', 'f4', 2)])
        out = structured_to_unstructured(a)
        assert_equal(out, np.zeros((4,5), dtype='f8'))

        b = np.array([(1, 2, 5), (4, 5, 7), (7, 8 ,11), (10, 11, 12)],
                     dtype=[('x', 'i4'), ('y', 'f4'), ('z', 'f8')])
        out = np.mean(structured_to_unstructured(b[['x', 'z']]), axis=-1)
        assert_equal(out, np.array([ 3. ,  5.5,  9. , 11. ]))
        out = np.mean(structured_to_unstructured(b[['x']]), axis=-1)
        assert_equal(out, np.array([ 1. ,  4. ,  7. , 10. ]))

        c = np.arange(20).reshape((4,5))
        out = unstructured_to_structured(c, a.dtype)
        want = np.array([( 0, ( 1.,  2), [ 3.,  4.]),
                         ( 5, ( 6.,  7), [ 8.,  9.]),
                         (10, (11., 12), [13., 14.]),
                         (15, (16., 17), [18., 19.])],
                     dtype=[('a', 'i4'),
                            ('b', [('f0', 'f4'), ('f1', 'u2')]),
                            ('c', 'f4', (2,))])
        assert_equal(out, want)

        d = np.array([(1, 2, 5), (4, 5, 7), (7, 8 ,11), (10, 11, 12)],
                     dtype=[('x', 'i4'), ('y', 'f4'), ('z', 'f8')])
        assert_equal(apply_along_fields(np.mean, d),
                     np.array([ 8.0/3,  16.0/3,  26.0/3, 11. ]))
        assert_equal(apply_along_fields(np.mean, d[['x', 'z']]),
                     np.array([ 3. ,  5.5,  9. , 11. ]))

        # check that for uniform field dtypes we get a view, not a copy:
        d = np.array([(1, 2, 5), (4, 5, 7), (7, 8 ,11), (10, 11, 12)],
                     dtype=[('x', 'i4'), ('y', 'i4'), ('z', 'i4')])
        dd = structured_to_unstructured(d)
        ddd = unstructured_to_structured(dd, d.dtype)
        assert_(dd.base is d)
        assert_(ddd.base is d)

        # including uniform fields with subarrays unpacked
        d = np.array([(1, [2,  3], [[ 4,  5], [ 6,  7]]),
                      (8, [9, 10], [[11, 12], [13, 14]])],
                     dtype=[('x0', 'i4'), ('x1', ('i4', 2)),
                            ('x2', ('i4', (2, 2)))])
        dd = structured_to_unstructured(d)
        ddd = unstructured_to_structured(dd, d.dtype)
        assert_(dd.base is d)
        assert_(ddd.base is d)

        # test that nested fields with identical names don't break anything
        point = np.dtype([('x', int), ('y', int)])
        triangle = np.dtype([('a', point), ('b', point), ('c', point)])
        arr = np.zeros(10, triangle)
        res = structured_to_unstructured(arr, dtype=int)
        assert_equal(res, np.zeros((10, 6), dtype=int))


        # test nested combinations of subarrays and structured arrays, gh-13333
        def subarray(dt, shape):
            return np.dtype((dt, shape))

        def structured(*dts):
            return np.dtype([('x{}'.format(i), dt) for i, dt in enumerate(dts)])

        def inspect(dt, dtype=None):
            arr = np.zeros((), dt)
            ret = structured_to_unstructured(arr, dtype=dtype)
            backarr = unstructured_to_structured(ret, dt)
            return ret.shape, ret.dtype, backarr.dtype

        dt = structured(subarray(structured(np.int32, np.int32), 3))
        assert_equal(inspect(dt), ((6,), np.int32, dt))

        dt = structured(subarray(subarray(np.int32, 2), 2))
        assert_equal(inspect(dt), ((4,), np.int32, dt))

        dt = structured(np.int32)
        assert_equal(inspect(dt), ((1,), np.int32, dt))

        dt = structured(np.int32, subarray(subarray(np.int32, 2), 2))
        assert_equal(inspect(dt), ((5,), np.int32, dt))

        dt = structured()
        assert_raises(ValueError, structured_to_unstructured, np.zeros(3, dt))

        # these currently don't work, but we may make it work in the future
        assert_raises(NotImplementedError, structured_to_unstructured,
                                           np.zeros(3, dt), dtype=np.int32)
        assert_raises(NotImplementedError, unstructured_to_structured,
                                           np.zeros((3,0), dtype=np.int32))

    def test_field_assignment_by_name(self):
        a = np.ones(2, dtype=[('a', 'i4'), ('b', 'f8'), ('c', 'u1')])
        newdt = [('b', 'f4'), ('c', 'u1')]

        assert_equal(require_fields(a, newdt), np.ones(2, newdt))

        b = np.array([(1,2), (3,4)], dtype=newdt)
        assign_fields_by_name(a, b, zero_unassigned=False)
        assert_equal(a, np.array([(1,1,2),(1,3,4)], dtype=a.dtype))
        assign_fields_by_name(a, b)
        assert_equal(a, np.array([(0,1,2),(0,3,4)], dtype=a.dtype))

        # test nested fields
        a = np.ones(2, dtype=[('a', [('b', 'f8'), ('c', 'u1')])])
        newdt = [('a', [('c', 'u1')])]
        assert_equal(require_fields(a, newdt), np.ones(2, newdt))
        b = np.array([((2,),), ((3,),)], dtype=newdt)
        assign_fields_by_name(a, b, zero_unassigned=False)
        assert_equal(a, np.array([((1,2),), ((1,3),)], dtype=a.dtype))
        assign_fields_by_name(a, b)
        assert_equal(a, np.array([((0,2),), ((0,3),)], dtype=a.dtype))

        # test unstructured code path for 0d arrays
        a, b = np.array(3), np.array(0)
        assign_fields_by_name(b, a)
        assert_equal(b[()], 3)


class TestRecursiveFillFields:
    # Test recursive_fill_fields.
    def test_simple_flexible(self):
        # Test recursive_fill_fields on flexible-array
        a = np.array([(1, 10.), (2, 20.)], dtype=[('A', int), ('B', float)])
        b = np.zeros((3,), dtype=a.dtype)
        test = recursive_fill_fields(a, b)
        control = np.array([(1, 10.), (2, 20.), (0, 0.)],
                           dtype=[('A', int), ('B', float)])
        assert_equal(test, control)

    def test_masked_flexible(self):
        # Test recursive_fill_fields on masked flexible-array
        a = ma.array([(1, 10.), (2, 20.)], mask=[(0, 1), (1, 0)],
                     dtype=[('A', int), ('B', float)])
        b = ma.zeros((3,), dtype=a.dtype)
        test = recursive_fill_fields(a, b)
        control = ma.array([(1, 10.), (2, 20.), (0, 0.)],
                           mask=[(0, 1), (1, 0), (0, 0)],
                           dtype=[('A', int), ('B', float)])
        assert_equal(test, control)


class TestMergeArrays:
    # Test merge_arrays

    def setup(self):
        x = np.array([1, 2, ])
        y = np.array([10, 20, 30])
        z = np.array(
            [('A', 1.), ('B', 2.)], dtype=[('A', '|S3'), ('B', float)])
        w = np.array(
            [(1, (2, 3.0, ())), (4, (5, 6.0, ()))],
            dtype=[('a', int), ('b', [('ba', float), ('bb', int), ('bc', [])])])
        self.data = (w, x, y, z)

    def test_solo(self):
        # Test merge_arrays on a single array.
        (_, x, _, z) = self.data

        test = merge_arrays(x)
        control = np.array([(1,), (2,)], dtype=[('f0', int)])
        assert_equal(test, control)
        test = merge_arrays((x,))
        assert_equal(test, control)

        test = merge_arrays(z, flatten=False)
        assert_equal(test, z)
        test = merge_arrays(z, flatten=True)
        assert_equal(test, z)

    def test_solo_w_flatten(self):
        # Test merge_arrays on a single array w & w/o flattening
        w = self.data[0]
        test = merge_arrays(w, flatten=False)
        assert_equal(test, w)

        test = merge_arrays(w, flatten=True)
        control = np.array([(1, 2, 3.0), (4, 5, 6.0)],
                           dtype=[('a', int), ('ba', float), ('bb', int)])
        assert_equal(test, control)

    def test_standard(self):
        # Test standard & standard
        # Test merge arrays
        (_, x, y, _) = self.data
        test = merge_arrays((x, y), usemask=False)
        control = np.array([(1, 10), (2, 20), (-1, 30)],
                           dtype=[('f0', int), ('f1', int)])
        assert_equal(test, control)

        test = merge_arrays((x, y), usemask=True)
        control = ma.array([(1, 10), (2, 20), (-1, 30)],
                           mask=[(0, 0), (0, 0), (1, 0)],
                           dtype=[('f0', int), ('f1', int)])
        assert_equal(test, control)
        assert_equal(test.mask, control.mask)

    def test_flatten(self):
        # Test standard & flexible
        (_, x, _, z) = self.data
        test = merge_arrays((x, z), flatten=True)
        control = np.array([(1, 'A', 1.), (2, 'B', 2.)],
                           dtype=[('f0', int), ('A', '|S3'), ('B', float)])
        assert_equal(test, control)

        test = merge_arrays((x, z), flatten=False)
        control = np.array([(1, ('A', 1.)), (2, ('B', 2.))],
                           dtype=[('f0', int),
                                  ('f1', [('A', '|S3'), ('B', float)])])
        assert_equal(test, control)

    def test_flatten_wflexible(self):
        # Test flatten standard & nested
        (w, x, _, _) = self.data
        test = merge_arrays((x, w), flatten=True)
        control = np.array([(1, 1, 2, 3.0), (2, 4, 5, 6.0)],
                           dtype=[('f0', int),
                                  ('a', int), ('ba', float), ('bb', int)])
        assert_equal(test, control)

        test = merge_arrays((x, w), flatten=False)
        controldtype = [('f0', int),
                                ('f1', [('a', int),
                                        ('b', [('ba', float), ('bb', int), ('bc', [])])])]
        control = np.array([(1., (1, (2, 3.0, ()))), (2, (4, (5, 6.0, ())))],
                           dtype=controldtype)
        assert_equal(test, control)

    def test_wmasked_arrays(self):
        # Test merge_arrays masked arrays
        (_, x, _, _) = self.data
        mx = ma.array([1, 2, 3], mask=[1, 0, 0])
        test = merge_arrays((x, mx), usemask=True)
        control = ma.array([(1, 1), (2, 2), (-1, 3)],
                           mask=[(0, 1), (0, 0), (1, 0)],
                           dtype=[('f0', int), ('f1', int)])
        assert_equal(test, control)
        test = merge_arrays((x, mx), usemask=True, asrecarray=True)
        assert_equal(test, control)
        assert_(isinstance(test, MaskedRecords))

    def test_w_singlefield(self):
        # Test single field
        test = merge_arrays((np.array([1, 2]).view([('a', int)]),
                             np.array([10., 20., 30.])),)
        control = ma.array([(1, 10.), (2, 20.), (-1, 30.)],
                           mask=[(0, 0), (0, 0), (1, 0)],
                           dtype=[('a', int), ('f1', float)])
        assert_equal(test, control)

    def test_w_shorter_flex(self):
        # Test merge_arrays w/ a shorter flexndarray.
        z = self.data[-1]

        # Fixme, this test looks incomplete and broken
        #test = merge_arrays((z, np.array([10, 20, 30]).view([('C', int)])))
        #control = np.array([('A', 1., 10), ('B', 2., 20), ('-1', -1, 20)],
        #                   dtype=[('A', '|S3'), ('B', float), ('C', int)])
        #assert_equal(test, control)

        # Hack to avoid pyflakes warnings about unused variables
        merge_arrays((z, np.array([10, 20, 30]).view([('C', int)])))
        np.array([('A', 1., 10), ('B', 2., 20), ('-1', -1, 20)],
                 dtype=[('A', '|S3'), ('B', float), ('C', int)])

    def test_singlerecord(self):
        (_, x, y, z) = self.data
        test = merge_arrays((x[0], y[0], z[0]), usemask=False)
        control = np.array([(1, 10, ('A', 1))],
                           dtype=[('f0', int),
                                  ('f1', int),
                                  ('f2', [('A', '|S3'), ('B', float)])])
        assert_equal(test, control)


class TestAppendFields:
    # Test append_fields

    def setup(self):
        x = np.array([1, 2, ])
        y = np.array([10, 20, 30])
        z = np.array(
            [('A', 1.), ('B', 2.)], dtype=[('A', '|S3'), ('B', float)])
        w = np.array([(1, (2, 3.0)), (4, (5, 6.0))],
                     dtype=[('a', int), ('b', [('ba', float), ('bb', int)])])
        self.data = (w, x, y, z)

    def test_append_single(self):
        # Test simple case
        (_, x, _, _) = self.data
        test = append_fields(x, 'A', data=[10, 20, 30])
        control = ma.array([(1, 10), (2, 20), (-1, 30)],
                           mask=[(0, 0), (0, 0), (1, 0)],
                           dtype=[('f0', int), ('A', int)],)
        assert_equal(test, control)

    def test_append_double(self):
        # Test simple case
        (_, x, _, _) = self.data
        test = append_fields(x, ('A', 'B'), data=[[10, 20, 30], [100, 200]])
        control = ma.array([(1, 10, 100), (2, 20, 200), (-1, 30, -1)],
                           mask=[(0, 0, 0), (0, 0, 0), (1, 0, 1)],
                           dtype=[('f0', int), ('A', int), ('B', int)],)
        assert_equal(test, control)

    def test_append_on_flex(self):
        # Test append_fields on flexible type arrays
        z = self.data[-1]
        test = append_fields(z, 'C', data=[10, 20, 30])
        control = ma.array([('A', 1., 10), ('B', 2., 20), (-1, -1., 30)],
                           mask=[(0, 0, 0), (0, 0, 0), (1, 1, 0)],
                           dtype=[('A', '|S3'), ('B', float), ('C', int)],)
        assert_equal(test, control)

    def test_append_on_nested(self):
        # Test append_fields on nested fields
        w = self.data[0]
        test = append_fields(w, 'C', data=[10, 20, 30])
        control = ma.array([(1, (2, 3.0), 10),
                            (4, (5, 6.0), 20),
                            (-1, (-1, -1.), 30)],
                           mask=[(
                               0, (0, 0), 0), (0, (0, 0), 0), (1, (1, 1), 0)],
                           dtype=[('a', int),
                                  ('b', [('ba', float), ('bb', int)]),
                                  ('C', int)],)
        assert_equal(test, control)


class TestStackArrays:
    # Test stack_arrays
    def setup(self):
        x = np.array([1, 2, ])
        y = np.array([10, 20, 30])
        z = np.array(
            [('A', 1.), ('B', 2.)], dtype=[('A', '|S3'), ('B', float)])
        w = np.array([(1, (2, 3.0)), (4, (5, 6.0))],
                     dtype=[('a', int), ('b', [('ba', float), ('bb', int)])])
        self.data = (w, x, y, z)

    def test_solo(self):
        # Test stack_arrays on single arrays
        (_, x, _, _) = self.data
        test = stack_arrays((x,))
        assert_equal(test, x)
        assert_(test is x)

        test = stack_arrays(x)
        assert_equal(test, x)
        assert_(test is x)

    def test_unnamed_fields(self):
        # Tests combinations of arrays w/o named fields
        (_, x, y, _) = self.data

        test = stack_arrays((x, x), usemask=False)
        control = np.array([1, 2, 1, 2])
        assert_equal(test, control)

        test = stack_arrays((x, y), usemask=False)
        control = np.array([1, 2, 10, 20, 30])
        assert_equal(test, control)

        test = stack_arrays((y, x), usemask=False)
        control = np.array([10, 20, 30, 1, 2])
        assert_equal(test, control)

    def test_unnamed_and_named_fields(self):
        # Test combination of arrays w/ & w/o named fields
        (_, x, _, z) = self.data

        test = stack_arrays((x, z))
        control = ma.array([(1, -1, -1), (2, -1, -1),
                            (-1, 'A', 1), (-1, 'B', 2)],
                           mask=[(0, 1, 1), (0, 1, 1),
                                 (1, 0, 0), (1, 0, 0)],
                           dtype=[('f0', int), ('A', '|S3'), ('B', float)])
        assert_equal(test, control)
        assert_equal(test.mask, control.mask)

        test = stack_arrays((z, x))
        control = ma.array([('A', 1, -1), ('B', 2, -1),
                            (-1, -1, 1), (-1, -1, 2), ],
                           mask=[(0, 0, 1), (0, 0, 1),
                                 (1, 1, 0), (1, 1, 0)],
                           dtype=[('A', '|S3'), ('B', float), ('f2', int)])
        assert_equal(test, control)
        assert_equal(test.mask, control.mask)

        test = stack_arrays((z, z, x))
        control = ma.array([('A', 1, -1), ('B', 2, -1),
                            ('A', 1, -1), ('B', 2, -1),
                            (-1, -1, 1), (-1, -1, 2), ],
                           mask=[(0, 0, 1), (0, 0, 1),
                                 (0, 0, 1), (0, 0, 1),
                                 (1, 1, 0), (1, 1, 0)],
                           dtype=[('A', '|S3'), ('B', float), ('f2', int)])
        assert_equal(test, control)

    def test_matching_named_fields(self):
        # Test combination of arrays w/ matching field names
        (_, x, _, z) = self.data
        zz = np.array([('a', 10., 100.), ('b', 20., 200.), ('c', 30., 300.)],
                      dtype=[('A', '|S3'), ('B', float), ('C', float)])
        test = stack_arrays((z, zz))
        control = ma.array([('A', 1, -1), ('B', 2, -1),
                            (
                                'a', 10., 100.), ('b', 20., 200.), ('c', 30., 300.)],
                           dtype=[('A', '|S3'), ('B', float), ('C', float)],
                           mask=[(0, 0, 1), (0, 0, 1),
                                 (0, 0, 0), (0, 0, 0), (0, 0, 0)])
        assert_equal(test, control)
        assert_equal(test.mask, control.mask)

        test = stack_arrays((z, zz, x))
        ndtype = [('A', '|S3'), ('B', float), ('C', float), ('f3', int)]
        control = ma.array([('A', 1, -1, -1), ('B', 2, -1, -1),
                            ('a', 10., 100., -1), ('b', 20., 200., -1),
                            ('c', 30., 300., -1),
                            (-1, -1, -1, 1), (-1, -1, -1, 2)],
                           dtype=ndtype,
                           mask=[(0, 0, 1, 1), (0, 0, 1, 1),
                                 (0, 0, 0, 1), (0, 0, 0, 1), (0, 0, 0, 1),
                                 (1, 1, 1, 0), (1, 1, 1, 0)])
        assert_equal(test, control)
        assert_equal(test.mask, control.mask)

    def test_defaults(self):
        # Test defaults: no exception raised if keys of defaults are not fields.
        (_, _, _, z) = self.data
        zz = np.array([('a', 10., 100.), ('b', 20., 200.), ('c', 30., 300.)],
                      dtype=[('A', '|S3'), ('B', float), ('C', float)])
        defaults = {'A': '???', 'B': -999., 'C': -9999., 'D': -99999.}
        test = stack_arrays((z, zz), defaults=defaults)
        control = ma.array([('A', 1, -9999.), ('B', 2, -9999.),
                            (
                                'a', 10., 100.), ('b', 20., 200.), ('c', 30., 300.)],
                           dtype=[('A', '|S3'), ('B', float), ('C', float)],
                           mask=[(0, 0, 1), (0, 0, 1),
                                 (0, 0, 0), (0, 0, 0), (0, 0, 0)])
        assert_equal(test, control)
        assert_equal(test.data, control.data)
        assert_equal(test.mask, control.mask)

    def test_autoconversion(self):
        # Tests autoconversion
        adtype = [('A', int), ('B', bool), ('C', float)]
        a = ma.array([(1, 2, 3)], mask=[(0, 1, 0)], dtype=adtype)
        bdtype = [('A', int), ('B', float), ('C', float)]
        b = ma.array([(4, 5, 6)], dtype=bdtype)
        control = ma.array([(1, 2, 3), (4, 5, 6)], mask=[(0, 1, 0), (0, 0, 0)],
                           dtype=bdtype)
        test = stack_arrays((a, b), autoconvert=True)
        assert_equal(test, control)
        assert_equal(test.mask, control.mask)
        with assert_raises(TypeError):
            stack_arrays((a, b), autoconvert=False)

    def test_checktitles(self):
        # Test using titles in the field names
        adtype = [(('a', 'A'), int), (('b', 'B'), bool), (('c', 'C'), float)]
        a = ma.array([(1, 2, 3)], mask=[(0, 1, 0)], dtype=adtype)
        bdtype = [(('a', 'A'), int), (('b', 'B'), bool), (('c', 'C'), float)]
        b = ma.array([(4, 5, 6)], dtype=bdtype)
        test = stack_arrays((a, b))
        control = ma.array([(1, 2, 3), (4, 5, 6)], mask=[(0, 1, 0), (0, 0, 0)],
                           dtype=bdtype)
        assert_equal(test, control)
        assert_equal(test.mask, control.mask)

    def test_subdtype(self):
        z = np.array([
            ('A', 1), ('B', 2)
        ], dtype=[('A', '|S3'), ('B', float, (1,))])
        zz = np.array([
            ('a', [10.], 100.), ('b', [20.], 200.), ('c', [30.], 300.)
        ], dtype=[('A', '|S3'), ('B', float, (1,)), ('C', float)])

        res = stack_arrays((z, zz))
        expected = ma.array(
            data=[
                (b'A', [1.0], 0),
                (b'B', [2.0], 0),
                (b'a', [10.0], 100.0),
                (b'b', [20.0], 200.0),
                (b'c', [30.0], 300.0)],
            mask=[
                (False, [False],  True),
                (False, [False],  True),
                (False, [False], False),
                (False, [False], False),
                (False, [False], False)
            ],
            dtype=zz.dtype
        )
        assert_equal(res.dtype, expected.dtype)
        assert_equal(res, expected)
        assert_equal(res.mask, expected.mask)


class TestJoinBy:
    def setup(self):
        self.a = np.array(list(zip(np.arange(10), np.arange(50, 60),
                                   np.arange(100, 110))),
                          dtype=[('a', int), ('b', int), ('c', int)])
        self.b = np.array(list(zip(np.arange(5, 15), np.arange(65, 75),
                                   np.arange(100, 110))),
                          dtype=[('a', int), ('b', int), ('d', int)])

    def test_inner_join(self):
        # Basic test of join_by
        a, b = self.a, self.b

        test = join_by('a', a, b, jointype='inner')
        control = np.array([(5, 55, 65, 105, 100), (6, 56, 66, 106, 101),
                            (7, 57, 67, 107, 102), (8, 58, 68, 108, 103),
                            (9, 59, 69, 109, 104)],
                           dtype=[('a', int), ('b1', int), ('b2', int),
                                  ('c', int), ('d', int)])
        assert_equal(test, control)

    def test_join(self):
        a, b = self.a, self.b

        # Fixme, this test is broken
        #test = join_by(('a', 'b'), a, b)
        #control = np.array([(5, 55, 105, 100), (6, 56, 106, 101),
        #                    (7, 57, 107, 102), (8, 58, 108, 103),
        #                    (9, 59, 109, 104)],
        #                   dtype=[('a', int), ('b', int),
        #                          ('c', int), ('d', int)])
        #assert_equal(test, control)

        # Hack to avoid pyflakes unused variable warnings
        join_by(('a', 'b'), a, b)
        np.array([(5, 55, 105, 100), (6, 56, 106, 101),
                  (7, 57, 107, 102), (8, 58, 108, 103),
                  (9, 59, 109, 104)],
                  dtype=[('a', int), ('b', int),
                         ('c', int), ('d', int)])

    def test_join_subdtype(self):
        # tests the bug in https://stackoverflow.com/q/44769632/102441
        foo = np.array([(1,)],
                       dtype=[('key', int)])
        bar = np.array([(1, np.array([1,2,3]))],
                       dtype=[('key', int), ('value', 'uint16', 3)])
        res = join_by('key', foo, bar)
        assert_equal(res, bar.view(ma.MaskedArray))

    def test_outer_join(self):
        a, b = self.a, self.b

        test = join_by(('a', 'b'), a, b, 'outer')
        control = ma.array([(0, 50, 100, -1), (1, 51, 101, -1),
                            (2, 52, 102, -1), (3, 53, 103, -1),
                            (4, 54, 104, -1), (5, 55, 105, -1),
                            (5, 65, -1, 100), (6, 56, 106, -1),
                            (6, 66, -1, 101), (7, 57, 107, -1),
                            (7, 67, -1, 102), (8, 58, 108, -1),
                            (8, 68, -1, 103), (9, 59, 109, -1),
                            (9, 69, -1, 104), (10, 70, -1, 105),
                            (11, 71, -1, 106), (12, 72, -1, 107),
                            (13, 73, -1, 108), (14, 74, -1, 109)],
                           mask=[(0, 0, 0, 1), (0, 0, 0, 1),
                                 (0, 0, 0, 1), (0, 0, 0, 1),
                                 (0, 0, 0, 1), (0, 0, 0, 1),
                                 (0, 0, 1, 0), (0, 0, 0, 1),
                                 (0, 0, 1, 0), (0, 0, 0, 1),
                                 (0, 0, 1, 0), (0, 0, 0, 1),
                                 (0, 0, 1, 0), (0, 0, 0, 1),
                                 (0, 0, 1, 0), (0, 0, 1, 0),
                                 (0, 0, 1, 0), (0, 0, 1, 0),
                                 (0, 0, 1, 0), (0, 0, 1, 0)],
                           dtype=[('a', int), ('b', int),
                                  ('c', int), ('d', int)])
        assert_equal(test, control)

    def test_leftouter_join(self):
        a, b = self.a, self.b

        test = join_by(('a', 'b'), a, b, 'leftouter')
        control = ma.array([(0, 50, 100, -1), (1, 51, 101, -1),
                            (2, 52, 102, -1), (3, 53, 103, -1),
                            (4, 54, 104, -1), (5, 55, 105, -1),
                            (6, 56, 106, -1), (7, 57, 107, -1),
                            (8, 58, 108, -1), (9, 59, 109, -1)],
                           mask=[(0, 0, 0, 1), (0, 0, 0, 1),
                                 (0, 0, 0, 1), (0, 0, 0, 1),
                                 (0, 0, 0, 1), (0, 0, 0, 1),
                                 (0, 0, 0, 1), (0, 0, 0, 1),
                                 (0, 0, 0, 1), (0, 0, 0, 1)],
                           dtype=[('a', int), ('b', int), ('c', int), ('d', int)])
        assert_equal(test, control)

    def test_different_field_order(self):
        # gh-8940
        a = np.zeros(3, dtype=[('a', 'i4'), ('b', 'f4'), ('c', 'u1')])
        b = np.ones(3, dtype=[('c', 'u1'), ('b', 'f4'), ('a', 'i4')])
        # this should not give a FutureWarning:
        j = join_by(['c', 'b'], a, b, jointype='inner', usemask=False)
        assert_equal(j.dtype.names, ['b', 'c', 'a1', 'a2'])

    def test_duplicate_keys(self):
        a = np.zeros(3, dtype=[('a', 'i4'), ('b', 'f4'), ('c', 'u1')])
        b = np.ones(3, dtype=[('c', 'u1'), ('b', 'f4'), ('a', 'i4')])
        assert_raises(ValueError, join_by, ['a', 'b', 'b'], a, b)

    @pytest.mark.xfail(reason="See comment at gh-9343")
    def test_same_name_different_dtypes_key(self):
        a_dtype = np.dtype([('key', 'S5'), ('value', '<f4')])
        b_dtype = np.dtype([('key', 'S10'), ('value', '<f4')])
        expected_dtype = np.dtype([
            ('key', 'S10'), ('value1', '<f4'), ('value2', '<f4')])

        a = np.array([('Sarah',  8.0), ('John', 6.0)], dtype=a_dtype)
        b = np.array([('Sarah', 10.0), ('John', 7.0)], dtype=b_dtype)
        res = join_by('key', a, b)

        assert_equal(res.dtype, expected_dtype)

    def test_same_name_different_dtypes(self):
        # gh-9338
        a_dtype = np.dtype([('key', 'S10'), ('value', '<f4')])
        b_dtype = np.dtype([('key', 'S10'), ('value', '<f8')])
        expected_dtype = np.dtype([
            ('key', '|S10'), ('value1', '<f4'), ('value2', '<f8')])

        a = np.array([('Sarah',  8.0), ('John', 6.0)], dtype=a_dtype)
        b = np.array([('Sarah', 10.0), ('John', 7.0)], dtype=b_dtype)
        res = join_by('key', a, b)

        assert_equal(res.dtype, expected_dtype)

    def test_subarray_key(self):
        a_dtype = np.dtype([('pos', int, 3), ('f', '<f4')])
        a = np.array([([1, 1, 1], np.pi), ([1, 2, 3], 0.0)], dtype=a_dtype)

        b_dtype = np.dtype([('pos', int, 3), ('g', '<f4')])
        b = np.array([([1, 1, 1], 3), ([3, 2, 1], 0.0)], dtype=b_dtype)

        expected_dtype = np.dtype([('pos', int, 3), ('f', '<f4'), ('g', '<f4')])
        expected = np.array([([1, 1, 1], np.pi, 3)], dtype=expected_dtype)

        res = join_by('pos', a, b)
        assert_equal(res.dtype, expected_dtype)
        assert_equal(res, expected)

    def test_padded_dtype(self):
        dt = np.dtype('i1,f4', align=True)
        dt.names = ('k', 'v')
        assert_(len(dt.descr), 3)  # padding field is inserted

        a = np.array([(1, 3), (3, 2)], dt)
        b = np.array([(1, 1), (2, 2)], dt)
        res = join_by('k', a, b)

        # no padding fields remain
        expected_dtype = np.dtype([
            ('k', 'i1'), ('v1', 'f4'), ('v2', 'f4')
        ])

        assert_equal(res.dtype, expected_dtype)


class TestJoinBy2:
    @classmethod
    def setup(cls):
        cls.a = np.array(list(zip(np.arange(10), np.arange(50, 60),
                                  np.arange(100, 110))),
                         dtype=[('a', int), ('b', int), ('c', int)])
        cls.b = np.array(list(zip(np.arange(10), np.arange(65, 75),
                                  np.arange(100, 110))),
                         dtype=[('a', int), ('b', int), ('d', int)])

    def test_no_r1postfix(self):
        # Basic test of join_by no_r1postfix
        a, b = self.a, self.b

        test = join_by(
            'a', a, b, r1postfix='', r2postfix='2', jointype='inner')
        control = np.array([(0, 50, 65, 100, 100), (1, 51, 66, 101, 101),
                            (2, 52, 67, 102, 102), (3, 53, 68, 103, 103),
                            (4, 54, 69, 104, 104), (5, 55, 70, 105, 105),
                            (6, 56, 71, 106, 106), (7, 57, 72, 107, 107),
                            (8, 58, 73, 108, 108), (9, 59, 74, 109, 109)],
                           dtype=[('a', int), ('b', int), ('b2', int),
                                  ('c', int), ('d', int)])
        assert_equal(test, control)

    def test_no_postfix(self):
        assert_raises(ValueError, join_by, 'a', self.a, self.b,
                      r1postfix='', r2postfix='')

    def test_no_r2postfix(self):
        # Basic test of join_by no_r2postfix
        a, b = self.a, self.b

        test = join_by(
            'a', a, b, r1postfix='1', r2postfix='', jointype='inner')
        control = np.array([(0, 50, 65, 100, 100), (1, 51, 66, 101, 101),
                            (2, 52, 67, 102, 102), (3, 53, 68, 103, 103),
                            (4, 54, 69, 104, 104), (5, 55, 70, 105, 105),
                            (6, 56, 71, 106, 106), (7, 57, 72, 107, 107),
                            (8, 58, 73, 108, 108), (9, 59, 74, 109, 109)],
                           dtype=[('a', int), ('b1', int), ('b', int),
                                  ('c', int), ('d', int)])
        assert_equal(test, control)

    def test_two_keys_two_vars(self):
        a = np.array(list(zip(np.tile([10, 11], 5), np.repeat(np.arange(5), 2),
                              np.arange(50, 60), np.arange(10, 20))),
                     dtype=[('k', int), ('a', int), ('b', int), ('c', int)])

        b = np.array(list(zip(np.tile([10, 11], 5), np.repeat(np.arange(5), 2),
                              np.arange(65, 75), np.arange(0, 10))),
                     dtype=[('k', int), ('a', int), ('b', int), ('c', int)])

        control = np.array([(10, 0, 50, 65, 10, 0), (11, 0, 51, 66, 11, 1),
                            (10, 1, 52, 67, 12, 2), (11, 1, 53, 68, 13, 3),
                            (10, 2, 54, 69, 14, 4), (11, 2, 55, 70, 15, 5),
                            (10, 3, 56, 71, 16, 6), (11, 3, 57, 72, 17, 7),
                            (10, 4, 58, 73, 18, 8), (11, 4, 59, 74, 19, 9)],
                           dtype=[('k', int), ('a', int), ('b1', int),
                                  ('b2', int), ('c1', int), ('c2', int)])
        test = join_by(
            ['a', 'k'], a, b, r1postfix='1', r2postfix='2', jointype='inner')
        assert_equal(test.dtype, control.dtype)
        assert_equal(test, control)

class TestAppendFieldsObj:
    """
    Test append_fields with arrays containing objects
    """
    # https://github.com/numpy/numpy/issues/2346

    def setup(self):
        from datetime import date
        self.data = dict(obj=date(2000, 1, 1))

    def test_append_to_objects(self):
        "Test append_fields when the base array contains objects"
        obj = self.data['obj']
        x = np.array([(obj, 1.), (obj, 2.)],
                      dtype=[('A', object), ('B', float)])
        y = np.array([10, 20], dtype=int)
        test = append_fields(x, 'C', data=y, usemask=False)
        control = np.array([(obj, 1.0, 10), (obj, 2.0, 20)],
                           dtype=[('A', object), ('B', float), ('C', int)])
        assert_equal(test, control)